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home-built matlab program  (MathWorks Inc)


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    MathWorks Inc home-built matlab program
    Home Built Matlab Program, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/home-built+program/pmc11923291__41467_2025_58139_MOESM5_ESM-416-17-18
    Average 90 stars, based on 1 article reviews
    home-built matlab program - by Bioz Stars, 2026-10
    90/100 stars

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    Article Title: A method for targeting a specified segment of DNA to a bacterial microorganelle
    Article Snippet: Analysis of the spectra was performed using a home-built program developed in MatLab environment (MathWorks, Natick, MA, USA).

    Article Title: Video-Rate Confocal Microscopy for Single-Molecule Imaging in Live Cells and Superresolution Fluorescence Imaging
    Article Snippet: All analysis steps were done using a home-built program written in MATLAB (MathWorks, Natick, MA).

    Article Title: 17 O MRS assesses the effect of mild hypothermia on oxygen consumption rate in tumors.
    Article Snippet: NMR in Biomedicine.. 2017;e3726. https://doi.org/10.1002/nbm.3726 Although oxygen consumption is a key factor in metabolic phenotyping, its assessment in tumors remains critical, as current technologies generally display poor specificity.. The objectives of this study were to explore the feasibility of direct O nuclear magnetic resonance (NMR) spectroscopy to assess oxygen metabolism in tumors and its modulations.

    Article Title: Interleaved 31 P MRS Imaging of Human Frontal and Occipital Lobes using Dual RF Coils Incorporated with Single-Channel Transmitter-Receiver and Dynamic B 0 Shimming
    Article Snippet: The PCr and γ-ATP resonance integral images were generated from the 3D FSW-CSI dataset using a home-built program coded in Matlab v14.0 (MathWorks, Natick, MA).

    Article Title: Kinesin-like protein KIF18A is required for faithful coordination of chromosome congression with cytokinesis.
    Article Snippet: doi:10.1111/febs.70019 The maintenance of genetic integrity in proliferating cells requires the coordinated regulation of DNA replication, chromosome segregation, and cytokinetic abscission.. Chromosome-microtubule interactions regulate mitosis, while interactions between the actin cytoskeleton and Myosin IIA dictate cytokinetic abscission.. This process, crucial for the equal distribution of the duplicated genome into two daughter cells, occurs perpendicular to the axis of chromosome segregation.

    Article Title: Efficient low-power heteronuclear decoupling in 13C high-resolution solid-state NMR under fast magic angle spinning.
    Article Snippet: The use of a low-power two-pulse phase modulation (TPPM) sequence is proposed for efficient 1H radio frequency (rf) decoupling in high-resolution 13C solid-state NMR (SSNMR) under fast MAS conditions.. Decoupling efficiency for different low-power decoupling sequences such as continuous-wave (cw), TPPM, XiX, and p-pulse (PIPS) train decoupling has been investigated at a spinning speed of 40 kHz for 13C CPMAS spectra of uniformly 13Cand 15N-labeled L-alanine.. It was found that the TPPM decoupling sequence, which was originally designed for high-power decoupling, provides the best decoupling efficiency at low power among all the low-power decoupling sequences examined here.

    Article Title: Morphological analysis of oligomeric vs. fibrillar forms of α-synuclein aggregates with super-resolution BALM imaging
    Article Snippet: Application of BALM (binding activated localization microcopy) was shown to allow facile imaging of amyloid fibrils with a typical diameter of ~14 nm FWHM.. We also observed a twisted ribbon-like substructure of mutant amyloid fibrils and even what appear to be toxic amyloid oligomers with their characteristic morphological features consistent with TEM images.. Use of an easily available staining dye in this method greatly enhances the prospect of addressing amyloidrelated diseases in their diagnosis and drug tests by allowing facile in situ and in vivo detection by optical imaging.

    Article Title: Crystallinity and motional dynamics study of a series of poly(arylene ether sulfone) segmented copolymer analogues.
    Article Snippet: Solid-state NMR spectroscopy was utilized to study the crystallinity and its correlation to the motional dynamics of a series of biphenol based poly(arylene ether sulfone) (PAES) copolymer analogues obtained by incorporating flexible aliphatic blocks.. Introduction of a series of conformationally flexible aliphatic blocks into the rigid aromatic PAES blocks in the copolymer sequence had increased the crystallinity of the polymer matrix because the copolymer system with aliphatic blocks provided a decrease in the glass transition temperature (Tg) while maintaining a nonvariant melting temperature (Tm).. Modified PAES copolymer systems with aliphatic blocks had yielded shorter H T1 relaxation times and longer H T1ρ relaxation times relative to the neat aromatic PAES copolymer.



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    (A-C) Images from a 75-year-old male with emphysema. Chest CT (A) shows centrilobular and paraseptal emphysema. Although emphysema is visible in images obtained using MRI with VIBE (B) or <t>CODE</t> (C) sequences, the extent of emphysema is underestimated on CODE imaging. (D-F) Images from a 75-year-old male with idiopathic pulmonary fibrosis and lung cancer. Chest CT (D) shows a subpleural nodule in right lower lobe and honeycombing, traction bronchiectasis, and reticulation in the both lower lobe. The VIBE (E) and CODE (F) images also indicate a subpleural nodule and honeycombing in the right lower lobe, but bronchiectasis and reticulation in the left lower lobe were less clear in the VIBE and <t>CODE</t> <t>images</t> as compared with the CT image.
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    (A-C) Images from a 75-year-old male with emphysema. Chest CT (A) shows centrilobular and paraseptal emphysema. Although emphysema is visible in images obtained using MRI with VIBE (B) or <t>CODE</t> (C) sequences, the extent of emphysema is underestimated on CODE imaging. (D-F) Images from a 75-year-old male with idiopathic pulmonary fibrosis and lung cancer. Chest CT (D) shows a subpleural nodule in right lower lobe and honeycombing, traction bronchiectasis, and reticulation in the both lower lobe. The VIBE (E) and CODE (F) images also indicate a subpleural nodule and honeycombing in the right lower lobe, but bronchiectasis and reticulation in the left lower lobe were less clear in the VIBE and <t>CODE</t> <t>images</t> as compared with the CT image.
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    (A-C) Images from a 75-year-old male with emphysema. Chest CT (A) shows centrilobular and paraseptal emphysema. Although emphysema is visible in images obtained using MRI with VIBE (B) or <t>CODE</t> (C) sequences, the extent of emphysema is underestimated on CODE imaging. (D-F) Images from a 75-year-old male with idiopathic pulmonary fibrosis and lung cancer. Chest CT (D) shows a subpleural nodule in right lower lobe and honeycombing, traction bronchiectasis, and reticulation in the both lower lobe. The VIBE (E) and CODE (F) images also indicate a subpleural nodule and honeycombing in the right lower lobe, but bronchiectasis and reticulation in the left lower lobe were less clear in the VIBE and <t>CODE</t> <t>images</t> as compared with the CT image.
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    Image Search Results


    (A-C) Images from a 75-year-old male with emphysema. Chest CT (A) shows centrilobular and paraseptal emphysema. Although emphysema is visible in images obtained using MRI with VIBE (B) or CODE (C) sequences, the extent of emphysema is underestimated on CODE imaging. (D-F) Images from a 75-year-old male with idiopathic pulmonary fibrosis and lung cancer. Chest CT (D) shows a subpleural nodule in right lower lobe and honeycombing, traction bronchiectasis, and reticulation in the both lower lobe. The VIBE (E) and CODE (F) images also indicate a subpleural nodule and honeycombing in the right lower lobe, but bronchiectasis and reticulation in the left lower lobe were less clear in the VIBE and CODE images as compared with the CT image.

    Journal: PLOS ONE

    Article Title: Clinical usability of 3D gradient-echo-based ultrashort echo time imaging: Is it enough to facilitate diagnostic decision in real-world practice?

    doi: 10.1371/journal.pone.0296696

    Figure Lengend Snippet: (A-C) Images from a 75-year-old male with emphysema. Chest CT (A) shows centrilobular and paraseptal emphysema. Although emphysema is visible in images obtained using MRI with VIBE (B) or CODE (C) sequences, the extent of emphysema is underestimated on CODE imaging. (D-F) Images from a 75-year-old male with idiopathic pulmonary fibrosis and lung cancer. Chest CT (D) shows a subpleural nodule in right lower lobe and honeycombing, traction bronchiectasis, and reticulation in the both lower lobe. The VIBE (E) and CODE (F) images also indicate a subpleural nodule and honeycombing in the right lower lobe, but bronchiectasis and reticulation in the left lower lobe were less clear in the VIBE and CODE images as compared with the CT image.

    Article Snippet: All CODE images were reconstructed offline with a home-built program using MATLAB (R2011a, MathWorks, Natick, MA, USA).

    Techniques: Imaging

    Chest CT (A), VIBE (B), and CODE (C) MRI at the level of both main bronchi (black arrow) in a 59-year-old male. Both main bronchi appear normal in the chest CT and CODE images, but it appears that there is stenosis in the right main bronchus due to an artifact in the VIBE image. (D-E) The chest CT (D) showed bronchiectasis (black arrow) in the right middle lobe and air trapping (yellow arrow) in the adjacent right upper lobe in a 73-year-old male. Bronchiectasis (black arrow) and air trapping (yellow arrow) are less clearly visible in the VIBE image (E) due to an internal artifact, but is more clearly visible in the CODE image (F).

    Journal: PLOS ONE

    Article Title: Clinical usability of 3D gradient-echo-based ultrashort echo time imaging: Is it enough to facilitate diagnostic decision in real-world practice?

    doi: 10.1371/journal.pone.0296696

    Figure Lengend Snippet: Chest CT (A), VIBE (B), and CODE (C) MRI at the level of both main bronchi (black arrow) in a 59-year-old male. Both main bronchi appear normal in the chest CT and CODE images, but it appears that there is stenosis in the right main bronchus due to an artifact in the VIBE image. (D-E) The chest CT (D) showed bronchiectasis (black arrow) in the right middle lobe and air trapping (yellow arrow) in the adjacent right upper lobe in a 73-year-old male. Bronchiectasis (black arrow) and air trapping (yellow arrow) are less clearly visible in the VIBE image (E) due to an internal artifact, but is more clearly visible in the CODE image (F).

    Article Snippet: All CODE images were reconstructed offline with a home-built program using MATLAB (R2011a, MathWorks, Natick, MA, USA).

    Techniques: